7OQD
A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT1636-S1_20)
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | LIQUID ANODE |
Source details | BRUKER METALJET |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-29 |
Detector | Bruker PHOTON III |
Wavelength(s) | 1.34 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.175, 79.196, 91.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.520 - 2.300 |
Rwork | 0.238 |
R-free | 0.28840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7an1 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.533 |
Data reduction software | SAINT |
Data scaling software | SAINT |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.523 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 24826 | 2444 |
<I/σ(I)> | 4.8 | 1.6 |
Completeness [%] | 98.8 | |
Redundancy | 4 | |
CC(1/2) | 0.968 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 40 % MPD, 0.1 M sodium cacodylate with a protein concentration of 20 mg/ml and the ligand concentration (3S-LewisA) of 20 mM. |