7ONG
Crystal structure of the computationally designed SAKe6BE-L1 protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 43.784, 75.799, 72.228 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.910 - 1.950 |
R-factor | 0.1935 |
Rwork | 0.192 |
R-free | 0.21850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Design model |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.910 | 37.910 | 2.000 |
High resolution limit [Å] | 1.950 | 8.940 | 1.950 |
Rmerge | 0.196 | 0.052 | 0.883 |
Rmeas | 0.212 | 0.057 | 0.957 |
Rpim | 0.080 | 0.022 | 0.366 |
Total number of observations | 119364 | 1247 | 8328 |
Number of reflections | 17257 | 192 | 1242 |
<I/σ(I)> | 8.5 | 23.3 | 2.8 |
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 6.9 | 6.5 | 6.7 |
CC(1/2) | 0.994 | 0.998 | 0.851 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293.15 | 0.2 M Calcium acetate, 0.1 M Sodium cacodylate, 40% (v/v) PEG 300 |