7OM3
Crystal structure of KOD DNA Polymerase in a binary complex with Hypoxanthine containing template
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06SA |
| Synchrotron site | SLS |
| Beamline | X06SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-07-12 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0000089622351307 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 113.356, 142.936, 65.582 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.450 - 1.920 |
| R-factor | 0.1841 |
| Rwork | 0.183 |
| R-free | 0.23370 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4k8z |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.214 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.19_4085) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.320 | 2.030 |
| High resolution limit [Å] | 1.910 | 1.910 |
| Rmeas | 0.148 | |
| Number of reflections | 147921 | 16579 |
| <I/σ(I)> | 7.39 | |
| Completeness [%] | 93.3 | 64.8 |
| Redundancy | 4.6 | 2.2 |
| CC(1/2) | 0.996 | 0.185 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291.15 | Morpheus E7: 0.12 M ethylene glycols (0.3 M diethylene glycol, 0.3 M triethylene glycol, 0.3 M tetraethylene glycol, 0.3 M pentaethylene glycol), 0.1 M sodium HEPES/MOPS pH 7.5, 50 % (v/v) of a mixture of glycerol (40 % v/v) and PEG 4000 (20 % w/v). |






