7OJ7
Crystal structure of human coxsackievirus A24v in complex with a pentavalent N-acetylneuraminic acid conjugate
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-26 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.976250 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 305.520, 365.550, 366.480 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.960 - 1.780 |
Rwork | 0.158 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4q4w |
RMSD bond length | 0.005 |
RMSD bond angle | 1.371 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0232 2018/13/08) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.962 | 1.890 |
High resolution limit [Å] | 1.780 | 1.780 |
Rmerge | 0.263 | 1.331 |
Rmeas | 0.282 | 1.428 |
Number of reflections | 1921680 | 308924 |
<I/σ(I)> | 6.6 | 1.1 |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 7.7 | |
CC(1/2) | 0.989 | 0.506 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 200 mM Magnesium chloride, 3.4 M 1,6-Hexanediol, 100 mM HEPES pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K |