7OFA
Keap1 kelch domain bound to a small molecule fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-26 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9772 |
Spacegroup name | P 61 |
Unit cell lengths | 103.505, 103.505, 55.746 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 51.750 - 2.220 |
R-factor | 0.2106 |
Rwork | 0.209 |
R-free | 0.24200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fnu |
RMSD bond length | 0.002 |
RMSD bond angle | 0.578 |
Data reduction software | DIALS (1.9.3) |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER (1.13_2998) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.750 | 2.300 |
High resolution limit [Å] | 2.220 | 2.221 |
Rmerge | 0.236 | 0.869 |
Rmeas | 0.243 | 0.906 |
Rpim | 0.060 | 0.246 |
Number of reflections | 16965 | 1696 |
<I/σ(I)> | 8.07 | 2.3 |
Completeness [%] | 99.9 | 99 |
Redundancy | 16.3 | 13.6 |
CC(1/2) | 0.985 | 0.966 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 0.5 M Ammonium sulfate, 0.1 M Sodium citrate tribasic dihydrate pH 5.6 and 1.0 M Lithium sulfate monohydrate |