7OF8
Keap1 kelch domain bound to a small molecule fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9772 |
Spacegroup name | P 61 |
Unit cell lengths | 104.320, 104.320, 55.986 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.160 - 1.780 |
R-factor | 0.1896 |
Rwork | 0.188 |
R-free | 0.22380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fnu |
RMSD bond length | 0.015 |
RMSD bond angle | 1.237 |
Data reduction software | DIALS (1.9.3) |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER (1.13_2998) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.160 | 1.843 |
High resolution limit [Å] | 1.779 | 1.779 |
Rmerge | 0.124 | 0.810 |
Rmeas | 0.129 | 0.856 |
Rpim | 0.035 | 0.271 |
Number of reflections | 33483 | 3311 |
<I/σ(I)> | 11.12 | 2.12 |
Completeness [%] | 99.7 | 99.31 |
Redundancy | 13.3 | 9.8 |
CC(1/2) | 0.998 | 0.631 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 0.5 M Ammonium sulfate, 0.1 M Sodium citrate tribasic dihydrate pH 5.6 and 1.0 M Lithium sulfate monohydrate |