7OCZ
Crystal Structure of the PID-3 RRM domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.28 |
Spacegroup name | P 65 |
Unit cell lengths | 43.294, 43.294, 158.181 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.480 - 1.820 |
R-factor | 0.1838 |
Rwork | 0.182 |
R-free | 0.20980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ocx |
RMSD bond length | 0.005 |
RMSD bond angle | 0.855 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1-4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.490 | 1.885 |
High resolution limit [Å] | 1.820 | 1.820 |
Number of reflections | 14314 | 1050 |
<I/σ(I)> | 38.78 | 0.56 |
Completeness [%] | 95.0 | |
Redundancy | 17.9 | |
CC(1/2) | 0.987 | 0.436 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.03 M Sodium nitrate, 0.03 M Sodium phosphatedibasic 0.03 M Ammonium sulfate 0.1 M HEPES, 0.1 M MOPS pH 7.5 20% v/v PEG 500 MME; 10% w/v PEG 20000 |