7OAV
Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.1048 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.192, 106.760, 63.552 |
Unit cell angles | 90.00, 116.53, 90.00 |
Refinement procedure
Resolution | 46.140 - 2.990 |
R-factor | 0.2039 |
Rwork | 0.202 |
R-free | 0.25530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7oa3 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.723 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.140 | 3.000 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.116 | 5.201 |
Number of reflections | 15836 | 2270 |
<I/σ(I)> | 8.6 | 0.4 |
Completeness [%] | 98.7 | 97.7 |
Redundancy | 7.1 | |
CC(1/2) | 0.212 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG 400, MES, Spermine tetrahydrochloride |