7OAR
Crystal structure of helicase Pif1 from Thermus oshimai in complex with parallel G-quadruplex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97777 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 151.782, 151.782, 219.534 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.390 - 2.580 |
R-factor | 0.1967 |
Rwork | 0.194 |
R-free | 0.24290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6s3e |
RMSD bond length | 0.008 |
RMSD bond angle | 1.150 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (dev_3512) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 131.447 | 2.682 |
High resolution limit [Å] | 2.580 | 2.580 |
Rmerge | 0.069 | 2.402 |
Rmeas | 0.070 | 2.461 |
Rpim | 0.016 | 0.534 |
Number of reflections | 877426 | 46926 |
<I/σ(I)> | 26.8 | 1.4 |
Completeness [%] | 94.1 | 52.8 |
Redundancy | 19.7 | 21.1 |
CC(1/2) | 1.000 | 0.651 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | Bis-Tris 0.1M PEG 20000 10% |