7O5R
Crystal structure of holo-SwHPA-Mn (hydroxyketoacid aldolase) from Sphingomonas wittichii RW1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9763 |
Spacegroup name | H 3 |
Unit cell lengths | 71.540, 71.540, 225.394 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 75.131 - 1.650 |
Rwork | 0.160 |
R-free | 0.19310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | apo-SwHKA |
RMSD bond length | 0.013 |
RMSD bond angle | 1.869 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 75.131 | 75.130 | 1.680 |
High resolution limit [Å] | 1.650 | 9.040 | 1.650 |
Rmerge | 0.150 | 0.059 | 0.997 |
Rmeas | 0.184 | 0.071 | 1.222 |
Rpim | 0.106 | 0.039 | 0.690 |
Number of reflections | 51766 | 322 | 2600 |
<I/σ(I)> | 9.1 | ||
Completeness [%] | 99.9 | 99.2 | 100 |
Redundancy | 5.9 | 6.2 | 6 |
CC(1/2) | 0.990 | 0.996 | 0.325 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277.15 | HEPES, Sodium Citrate |