Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7NY8

Affimer K69 - KRAS protein complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-15
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9795
Spacegroup nameP 1 21 1
Unit cell lengths39.008, 168.775, 39.653
Unit cell angles90.00, 92.70, 90.00
Refinement procedure
Resolution84.530 - 1.800
R-factor0.1568
Rwork0.154
R-free0.20970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4obe 4n6t
RMSD bond length0.005
RMSD bond angle1.314
Data reduction softwareDIALS (3.1.3)
Data scaling softwareDIALS (3.1.3)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]168.7701.830
High resolution limit [Å]1.8001.800
Rmerge0.0720.734
Rmeas0.0780.794
Rpim0.0300.300
Number of reflections472362336
<I/σ(I)>19.3
Completeness [%]100.0100
Redundancy6.96.9
CC(1/2)0.9990.821
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52910.1M imidazole, 0.1M MES monohydrate, 20% w/v PEG 500 MME, 10% w/v PEG 20000, 0.12M 1,6-hexanediol, 0.12M 1,2-propanediol, 0.12M 1,4-butanediol, 0.12M 1-butanol, 0.12M 2-propanol, 0.12M 1,3-propanediol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon