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7NW3

X-ray crystallographic study of PIYDIN, which contains the truncation determinants of binding PI and N, bound to RoAb13, a CCR5 antibody

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-22
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameP 41 21 2
Unit cell lengths76.607, 76.607, 270.060
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.515 - 3.200
R-factor0.269545672354
Rwork0.268
R-free0.29269
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4s2s
RMSD bond length0.004
RMSD bond angle0.792
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]270.0603.370
High resolution limit [Å]3.2003.200
Rmerge0.179
Rmeas0.183
Rpim0.0371.228
Number of reflections141511984
<I/σ(I)>14.30.5
Completeness [%]99.9
Redundancy24.8
CC(1/2)0.9990.529
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION29310 mg/ml protein, 20 mM HEPES pH 7.0, 0.1 M sodium chloride, 660 uM PIYDIN peptide, 1.8 M ammonium sulfate

245663

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