7NTK
PALS1 PDZ1 domain with SARS-CoV-2_E PBM complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95372 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.688, 103.762, 59.076 |
Unit cell angles | 90.00, 103.98, 90.00 |
Refinement procedure
Resolution | 29.610 - 1.900 |
R-factor | 0.1975 |
Rwork | 0.196 |
R-free | 0.22870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uu6 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.581 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER (1.15.2-3472-000) |
Refinement software | PHENIX (1.18.2_3874+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.590 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.129 | 0.725 |
Number of reflections | 26253 | 4885 |
<I/σ(I)> | 3.4 | |
Completeness [%] | 99.4 | |
Redundancy | 2.9 | |
CC(1/2) | 0.987 | 0.431 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 0.2M Sodium acetate trihydrate, 0.1M TRIS pH 8.5, 30% w/v PEG 4000 |