7NPQ
Crystal structure of the human LL37(17-29) I24C mutant antimicrobial peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-12-17 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9763 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 34.920, 34.920, 44.570 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 27.490 - 1.500 |
| R-factor | 0.1803 |
| Rwork | 0.179 |
| R-free | 0.19170 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDBid 6S6M with residues mutated to alanine |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.946 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 27.490 | 27.490 | 1.550 |
| High resolution limit [Å] | 1.500 | 10.000 | 1.500 |
| Rmerge | 0.052 | 0.018 | 0.658 |
| Rmeas | 0.056 | 0.020 | 0.751 |
| Total number of observations | 35742 | ||
| Number of reflections | 4721 | 22 | 383 |
| <I/σ(I)> | 19.87 | 28.96 | 2.17 |
| Completeness [%] | 99.0 | 88 | 91 |
| Redundancy | 7.571 | 3.864 | 3.773 |
| CC(1/2) | 0.999 | 1.000 | 0.699 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | The LL-37(17-29) I24C peptide was mixed with 0.1mM DTT in water: Reservoir contained 2.8 M sodium acetate trihydrate pH 7.0 |






