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7NH4

Co-Crystal Structure of Akt1 in Complex with Covalent-Allosteric Akt Inhibitor 3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-22
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.99999
Spacegroup nameP 21 21 21
Unit cell lengths70.760, 70.950, 91.130
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.560 - 2.300
R-factor0.2241
Rwork0.223
R-free0.24570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6hhg
RMSD bond length0.002
RMSD bond angle0.494
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.5602.400
High resolution limit [Å]2.3002.300
Rmerge0.0601.502
Rmeas0.0641.614
Number of reflections210012463
<I/σ(I)>15.03
Completeness [%]99.9100
Redundancy7.47.5
CC(1/2)0.9990.608
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52931.25 mM Na-acetate, 3.75 mM Na-citrate, 12% v/v PEG 2000 MME, pH 6.5, 3 mg/mL Akt1 (in 25 mM TRIS, 100 mM NaCl, 10% v/v Glycerol, 5 mM DTT, pH 7.5), 1 uL reservoir + 1 uL protein solution

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PDB entries from 2024-05-15

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