7N7Z
Structure of Acetyl-CoA acetyltransferase from Syntrophomonas wolfei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 81.070, 81.070, 242.310 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.640 - 2.020 |
R-factor | 0.2369 |
Rwork | 0.233 |
R-free | 0.27420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wys |
RMSD bond length | 0.002 |
RMSD bond angle | 0.480 |
Data reduction software | XDS (VERSION OCT 15, 2015) |
Data scaling software | XSCALE (VERSION OCT 15, 2015) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.640 | 2.094 |
High resolution limit [Å] | 2.020 | 2.020 |
Rmerge | 0.104 | 0.802 |
Rmeas | 0.114 | 0.893 |
Rpim | 0.046 | 0.387 |
Number of reflections | 53598 | 5118 |
<I/σ(I)> | 10.47 | 1.63 |
Completeness [%] | 99.4 | 96.93 |
Redundancy | 5.9 | 5.1 |
CC(1/2) | 0.997 | 0.511 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | Protein buffer: 20 mM Tris pH 8, 150 mM NaCl, 5 mM B-ME. Crystallization buffer: 0.1 M Sodium formate pH 7.0, 12% PEG 3350. Cryo buffer: 23% PEG 3350, 5% PEG 400. |