7N6L
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide EANQQKPLLGLFADG
Replaces: 7JMZExperimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-04-14 |
| Detector | DECTRIS PILATUS3 R 200K-A |
| Wavelength(s) | 1.5418 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 37.621, 95.607, 117.614 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.850 - 2.400 |
| R-factor | 0.2597 |
| Rwork | 0.256 |
| R-free | 0.33230 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1dkz |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.407 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.430 |
| High resolution limit [Å] | 2.390 | 6.480 | 2.390 |
| Rmerge | 0.166 | 0.100 | 2.182 |
| Rmeas | 0.186 | 0.113 | 2.581 |
| Rpim | 0.080 | 0.050 | 1.339 |
| Total number of observations | 42388 | ||
| Number of reflections | 8602 | 488 | 406 |
| <I/σ(I)> | 8.7 | ||
| Completeness [%] | 98.9 | 99.2 | 92.3 |
| Redundancy | 4.9 | 4.8 | 3.2 |
| CC(1/2) | 0.996 | 0.332 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 2.8 M (NH4)2SO4, 0.1 M K3PO4 |






