7N6E
TCR peptide HLA-A2 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95365 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.832, 95.131, 168.755 |
Unit cell angles | 90.00, 100.18, 90.00 |
Refinement procedure
Resolution | 47.850 - 3.200 |
R-factor | 0.2424 |
Rwork | 0.239 |
R-free | 0.29410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 6VRM & 3GSO |
RMSD bond length | 0.002 |
RMSD bond angle | 0.480 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.850 | 3.370 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.183 | 0.629 |
Rmeas | 0.259 | 0.889 |
Rpim | 0.168 | 0.628 |
Number of reflections | 31387 | 3149 |
<I/σ(I)> | 4.16 | 1.4 |
Completeness [%] | 95.4 | 96.17 |
Redundancy | 2.5 | 2.3 |
CC(1/2) | 0.842 | 0.381 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293.15 | 20% PEG3350, 0.2 M sodium thiocyanate, 100 mM Tris-Cl |