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7N4M

Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2151.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-E
Synchrotron siteAPS
Beamline21-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-04
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97
Spacegroup nameP 43 21 2
Unit cell lengths112.913, 112.913, 239.508
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.994 - 3.790
R-factor0.2604
Rwork0.258
R-free0.31680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5xwd 4rir
RMSD bond length0.002
RMSD bond angle0.500
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]119.7503.780
High resolution limit [Å]3.5703.570
Rpim0.060
Number of reflections351055627
<I/σ(I)>13
Completeness [%]99.798.3
Redundancy1313.2
CC(1/2)0.9900.140
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62910.1 M Sodium acetate trihydrate pH 4.6, 2.0 M Ammonium sulfate

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