7MPQ
Bartonella henselae NrnC cleaving pGG in the presence of Mn2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-28 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.8917 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 71.681, 127.799, 128.809 |
Unit cell angles | 90.00, 94.87, 90.00 |
Refinement procedure
Resolution | 128.340 - 2.350 |
R-factor | 0.1639 |
Rwork | 0.162 |
R-free | 0.20630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yt3 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.858 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 128.340 | 2.380 |
High resolution limit [Å] | 2.350 | 2.350 |
Number of reflections | 174471 | 12956 |
<I/σ(I)> | 11 | |
Completeness [%] | 98.8 | |
Redundancy | 6.6 | |
CC(1/2) | 0.994 | 0.709 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | 0.1 M Succinic acid; 10% PEG 3,350; 20% xylitol, 5 mM MnCl2 (soak) |