7MNV
Crystal Structure of the ZnF8 of Nucleoporin NUP358/RanBP2 in complex with Ran-GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.2825 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 60.470, 80.470, 58.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.300 - 1.800 |
R-factor | 0.1606 |
Rwork | 0.159 |
R-free | 0.18550 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.050 | 29.050 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmeas | 0.119 | 0.053 | 1.896 |
Rpim | 0.033 | 0.015 | 0.533 |
Total number of observations | 341183 | 33750 | 31307 |
Number of reflections | 26934 | 2885 | 2561 |
<I/σ(I)> | 14 | 40 | 1.2 |
Completeness [%] | 99.6 | 100 | 96.4 |
Redundancy | 12.7 | 11.7 | 12.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 294 | 19% (w/v) PEG 3350; 0.1 M Bis-Tris |