7MJZ
The structure of MiaB with pentasulfide bridge
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.078 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.215, 81.125, 118.326 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.680 - 2.080 |
R-factor | 0.1846 |
Rwork | 0.182 |
R-free | 0.22140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qgq |
RMSD bond length | 0.002 |
RMSD bond angle | 0.567 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.060 |
High resolution limit [Å] | 2.020 | 5.290 | 2.020 |
Rmerge | 0.140 | 0.041 | 0.858 |
Rmeas | 0.151 | 0.045 | 0.929 |
Rpim | 0.056 | 0.017 | 0.354 |
Number of reflections | 38918 | 2131 | 1880 |
<I/σ(I)> | 6 | ||
Completeness [%] | 99.9 | 99.9 | 99.9 |
Redundancy | 7 | 6.8 | 6.7 |
CC(1/2) | 0.999 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.2 M potassium formate, pH 7.3, 20% polyethylene glycol 3350 |