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7MJW

Methylated MiaB in the complex with 5'-deoxyadenosine, methionine and RNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyPIXEL
Collection date2018-10-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0033
Spacegroup nameP 1 21 1
Unit cell lengths68.900, 97.413, 80.738
Unit cell angles90.00, 108.08, 90.00
Refinement procedure
Resolution39.080 - 1.400
R-factor0.1497
Rwork0.149
R-free0.17370
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qgq
RMSD bond length0.018
RMSD bond angle1.848
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.430
High resolution limit [Å]1.3503.6601.400
Rmerge0.0640.0300.882
Rmeas0.0710.0340.977
Rpim0.0300.0140.417
Number of reflections3086071129011074
<I/σ(I)>9.5
Completeness [%]99.999.799.9
Redundancy5.55.55.3
CC(1/2)0.9980.716
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298100 mM sodium cacodylate pH 5.5, 13% PEG 4000, 1,2-butanediol

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PDB entries from 2024-05-15

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