7MJA
HLA-A*24:02 bound to Neuroblastoma derived PHOX2B peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 77.211, 77.211, 174.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.875 - 1.690 |
R-factor | 0.1754 |
Rwork | 0.175 |
R-free | 0.19900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vxn |
RMSD bond length | 0.015 |
RMSD bond angle | 1.228 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 87.430 | 1.720 |
High resolution limit [Å] | 1.690 | 1.690 |
Rmerge | 0.109 | 0.671 |
Number of reflections | 60180 | 3045 |
<I/σ(I)> | 18.4 | 4.8 |
Completeness [%] | 100.0 | |
Redundancy | 25.7 | |
CC(1/2) | 0.990 | 0.960 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.1 M HEPES pH 7.0, 10% PEG 6000 |