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7MJ8

HLA-A*02:01 bound to Neuroblastoma Derived IGFBPL1 peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.11583
Spacegroup nameC 1 2 1
Unit cell lengths111.700, 79.020, 60.240
Unit cell angles90.00, 97.14, 90.00
Refinement procedure
Resolution59.773 - 1.790
R-factor0.1561
Rwork0.154
R-free0.18950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5c07
RMSD bond length0.009
RMSD bond angle1.021
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]64.3401.830
High resolution limit [Å]1.7901.790
Rmerge0.0790.530
Number of reflections480802814
<I/σ(I)>10.72.2
Completeness [%]98.2
Redundancy5.8
CC(1/2)0.9900.880
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2951M Sodium Citrate Dibasic, 0.1M Sodium Cacodylate pH 6.5

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PDB entries from 2024-05-15

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