7MJ8
HLA-A*02:01 bound to Neuroblastoma Derived IGFBPL1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.11583 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 111.700, 79.020, 60.240 |
Unit cell angles | 90.00, 97.14, 90.00 |
Refinement procedure
Resolution | 59.773 - 1.790 |
R-factor | 0.1561 |
Rwork | 0.154 |
R-free | 0.18950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c07 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.021 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.340 | 1.830 |
High resolution limit [Å] | 1.790 | 1.790 |
Rmerge | 0.079 | 0.530 |
Number of reflections | 48080 | 2814 |
<I/σ(I)> | 10.7 | 2.2 |
Completeness [%] | 98.2 | |
Redundancy | 5.8 | |
CC(1/2) | 0.990 | 0.880 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 1M Sodium Citrate Dibasic, 0.1M Sodium Cacodylate pH 6.5 |