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7MGB

Concanavalin A bound to a DNA glycoconjugate, A(Man-T)AT

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-25
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0782
Spacegroup nameP 2 21 21
Unit cell lengths68.009, 117.480, 122.490
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution84.790 - 2.450
R-factor0.2154
Rwork0.213
R-free0.26221
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cna
RMSD bond length0.009
RMSD bond angle1.637
Data reduction softwareiMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.7902.580
High resolution limit [Å]2.4502.450
Rmerge0.1470.830
Rmeas0.1580.888
Number of reflections331895282
<I/σ(I)>3.9634
Completeness [%]94.999.92
Redundancy7.437.53
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8295Sitting drop comprising 1 uL of Concanavalin A (40 uM) and A(Man-T)AT (160 uM) + 1 uL crystallization condition (Helix screen, condition H10: 0.05 M lithium sulfate, 0.03 M magnesium sulfate heptahydrate, 0.05 M bis Tris (pH 8), 15% w/v PEG 3350). Reservoir contained 70 uL of crystallization condition

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