7MGB
Concanavalin A bound to a DNA glycoconjugate, A(Man-T)AT
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-D |
| Synchrotron site | APS |
| Beamline | 21-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-02-25 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.0782 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 68.009, 117.480, 122.490 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 84.790 - 2.450 |
| R-factor | 0.2154 |
| Rwork | 0.213 |
| R-free | 0.26221 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5cna |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.637 |
| Data reduction software | iMOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 84.790 | 2.580 |
| High resolution limit [Å] | 2.450 | 2.450 |
| Rmerge | 0.147 | 0.830 |
| Rmeas | 0.158 | 0.888 |
| Number of reflections | 33189 | 5282 |
| <I/σ(I)> | 3.9634 | |
| Completeness [%] | 94.9 | 99.92 |
| Redundancy | 7.43 | 7.53 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 295 | Sitting drop comprising 1 uL of Concanavalin A (40 uM) and A(Man-T)AT (160 uM) + 1 uL crystallization condition (Helix screen, condition H10: 0.05 M lithium sulfate, 0.03 M magnesium sulfate heptahydrate, 0.05 M bis Tris (pH 8), 15% w/v PEG 3350). Reservoir contained 70 uL of crystallization condition |






