7MG2
Concanavalin A crystallized in the presence of Man-8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-07-19 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9786 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 61.420, 86.130, 89.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 62.060 - 1.800 |
R-factor | 0.186 |
Rwork | 0.184 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jbc |
RMSD bond length | 0.010 |
RMSD bond angle | 1.560 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.060 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.148 | 0.630 |
Number of reflections | 21234 | 3218 |
<I/σ(I)> | 2.5465 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 9.11 | 8.95 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 295 | Sitting drop comprising 1 uL of Concanavalin A (32 uM) and mannose-squaramide (128 uM) + 1 uL crystallization condition (Helix screen, condition B6: 0.1 M sodium chloride, 0.005 M strontium chloride hexahydrate, 0.05 M MES (pH 6.5), 17% w/v PEG 4000). Reservoir contained 70 uL of crystallization condition. |