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7MCM

Crystal Structure of Enoyl-CoA hydratase from Mycolicibacterium smegmatis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2021-03-04
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 63
Unit cell lengths104.130, 104.130, 83.750
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.700 - 2.050
R-factor0.1681
Rwork0.166
R-free0.19900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)MR-rosetta based on top5 models from HHPRED: 4jcs 4kd6 6l3o 3qmj 4mi2
RMSD bond length0.007
RMSD bond angle0.873
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX (1.19 4175)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.100
High resolution limit [Å]2.0509.1702.050
Rmerge0.0630.0330.633
Rmeas0.0670.0350.672
Number of reflections324673862379
<I/σ(I)>21.5453.124.03
Completeness [%]100.097.7100
Redundancy8.8198.0838.839
CC(1/2)0.9990.9990.933
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7287Rigaku Reagents JCSG+ screen, condition B8: 200mM magnesium chloride, 100mM Tris / HCl pH 7.0, 10% (w/v) PEG 8000: MysmA.00358.n.a1.PS00566 at 8.7mg/ml: tray 319818 B8: cryo: 20% EG: puck ACC1-3

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PDB entries from 2024-05-15

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