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7MCD

Crystal structure of an AI-designed TIM-barrel F15C

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-02-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameP 1 21 1
Unit cell lengths44.230, 103.570, 80.940
Unit cell angles90.00, 90.39, 90.00
Refinement procedure
Resolution38.930 - 1.900
R-factor0.1809
Rwork0.177
R-free0.25680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Designed model
RMSD bond length0.006
RMSD bond angle1.353
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]38.93038.9301.950
High resolution limit [Å]1.9008.5001.900
Rmerge0.1420.0991.546
Rmeas0.1470.1031.604
Total number of observations792464
Number of reflections569796644228
<I/σ(I)>1026.331.49
Completeness [%]99.29999.8
Redundancy13.90814.42814.146
CC(1/2)0.9970.9960.743
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP629330% PEG3350, 0.150M Magnesium acetate tetrahydrate, 0.1 M Bis Tris (pH 6.0)

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PDB entries from 2024-05-15

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