7MAT
SARS-CoV-2 Main Protease (Mpro) in Complex with Covalent Inhibitor dFFR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-08-10 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.973, 105.769, 54.389 |
Unit cell angles | 90.00, 104.00, 90.00 |
Refinement procedure
Resolution | 23.640 - 2.740 |
R-factor | 0.1988 |
Rwork | 0.196 |
R-free | 0.25950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7l0d |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.640 | 2.840 |
High resolution limit [Å] | 2.740 | 2.740 |
Rmerge | 0.061 | 0.425 |
Rpim | 0.037 | 0.264 |
Number of reflections | 13621 | 1321 |
<I/σ(I)> | 16.9 | |
Completeness [%] | 98.2 | 95.1 |
Redundancy | 3.7 | 3.5 |
CC(1/2) | 0.998 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.8M AmSO4 + 0.1M MES pH 6.5 + 3% Dioxane |