7M97
Crystal structure of the bromodomain from Plasmodium falciparum bromodomain protein 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2020-07-08 |
Detector | RDI CMOS_8M |
Wavelength(s) | 0.9762 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 38.051, 88.667, 106.797 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.840 - 2.000 |
R-factor | 0.1958 |
Rwork | 0.194 |
R-free | 0.23470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ulc |
RMSD bond length | 0.008 |
RMSD bond angle | 0.889 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.840 | 2.072 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.026 | 0.267 |
Rmeas | 0.037 | 0.378 |
Rpim | 0.026 | 0.267 |
Number of reflections | 12597 | 1203 |
<I/σ(I)> | 19.24 | 2.93 |
Completeness [%] | 99.6 | |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.930 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 0.3 M lithium sulfate, 0.1 M tris, pH 8.5, 38% PEG400 |