7M5L
PCNA bound to peptide mimetic with linker
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-03 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.960, 84.468, 134.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.760 - 3.000 |
R-factor | 0.2606 |
Rwork | 0.260 |
R-free | 0.27520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1axc |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.760 | 48.760 | 3.180 |
High resolution limit [Å] | 3.000 | 9.000 | 3.000 |
Rmerge | 0.181 | 0.040 | 3.524 |
Rmeas | 0.188 | 0.041 | 3.671 |
Rpim | 0.052 | 0.012 | 1.019 |
Total number of observations | 222239 | 8145 | 33802 |
Number of reflections | 16781 | 703 | 2651 |
<I/σ(I)> | 9.6 | 46.4 | 0.7 |
Completeness [%] | 100.0 | 99.2 | 100 |
Redundancy | 13.2 | 11.6 | 12.8 |
CC(1/2) | 0.999 | 0.999 | 0.456 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293.15 | 0.18M magnesium acetate, 19.2% poly(ethylene) glycol 3350 |