7M4S
Crystal structure of macrocyclase AMdnB from Anabaena sp. PCC 7120
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-06 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.033 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.479, 132.464, 83.010 |
Unit cell angles | 90.00, 91.00, 90.00 |
Refinement procedure
Resolution | 41.500 - 2.493 |
R-factor | 0.2016 |
Rwork | 0.199 |
R-free | 0.25760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ig8 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.723 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.500 | 2.582 |
High resolution limit [Å] | 2.493 | 2.493 |
Rmerge | 0.146 | 1.265 |
Rmeas | 0.159 | |
Rpim | 0.061 | 0.510 |
Number of reflections | 45272 | 4314 |
<I/σ(I)> | 9.29 | 1.26 |
Completeness [%] | 97.7 | 93.23 |
Redundancy | 6.77 | |
CC(1/2) | 0.994 | 0.596 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 293.15 | 0.18 M Tri-ammonium citrate, 20% (w/v) PEG 3350 and 0.012 M praseodymium (III) acetate hydrate |