7M3V
RNA bulged-G motif
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.10567 |
Spacegroup name | P 43 |
Unit cell lengths | 29.657, 29.657, 76.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.660 - 2.190 |
R-factor | 0.1814 |
Rwork | 0.177 |
R-free | 0.21350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1q9a |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.660 | 27.660 | 2.250 |
High resolution limit [Å] | 2.190 | 9.820 | 2.190 |
Rmerge | 0.118 | 0.079 | 0.335 |
Rmeas | 0.128 | 0.087 | 0.368 |
Total number of observations | 45236 | ||
Number of reflections | 6691 | 68 | 500 |
<I/σ(I)> | 13.64 | 20.45 | 7.22 |
Completeness [%] | 99.8 | 98.6 | 97.7 |
Redundancy | 6.761 | 6.235 | 5.992 |
CC(1/2) | 0.995 | 0.997 | 0.932 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | MOPS, ammonium sulfate, magnesium chloride |