7M01
Structure of SARS-CoV-2 3CL protease in complex with inhibitor 14c
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-02 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.093, 98.550, 59.007 |
Unit cell angles | 90.00, 108.00, 90.00 |
Refinement procedure
Resolution | 48.770 - 1.650 |
R-factor | 0.1801 |
Rwork | 0.178 |
R-free | 0.22390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xmk |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.770 | 48.770 | 1.680 |
High resolution limit [Å] | 1.650 | 9.040 | 1.650 |
Rmerge | 0.139 | 0.078 | 1.381 |
Total number of observations | 733433 | 4698 | 34848 |
Number of reflections | 71947 | 463 | 3569 |
<I/σ(I)> | 8.7 | 22.4 | 1.6 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 10.2 | 10.1 | 9.8 |
CC(1/2) | 0.997 | 0.995 | 0.777 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 20% w/v PEG5000 MME, 100 mM Bis-Tris |