7LZT
Structure of SARS-CoV-2 3CL protease in complex with inhibitor 8b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.398, 52.995, 46.615 |
Unit cell angles | 90.00, 102.72, 90.00 |
Refinement procedure
Resolution | 34.630 - 1.550 |
R-factor | 0.1693 |
Rwork | 0.168 |
R-free | 0.19660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xmk |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.790 | 47.790 | 1.580 |
High resolution limit [Å] | 1.550 | 8.490 | 1.550 |
Rmerge | 0.093 | 0.049 | 1.349 |
Total number of observations | 270384 | 1696 | 13666 |
Number of reflections | 39266 | 267 | 1923 |
<I/σ(I)> | 10.5 | 30.6 | 1.7 |
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 6.9 | 6.4 | 7.1 |
CC(1/2) | 0.998 | 0.998 | 0.655 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.5 M ammonium sulfate, 100 mM MES |