7LZ1
Structure of glutamate receptor-like channel GLR3.4 ligand-binding domain in complex with serine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-13 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97918 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 74.509, 74.509, 507.975 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 64.610 - 1.510 |
R-factor | 0.2038 |
Rwork | 0.202 |
R-free | 0.23230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7lz0 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.718 |
Data reduction software | DENZO |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.570 | 72.570 | 1.540 |
High resolution limit [Å] | 1.510 | 8.270 | 1.510 |
Rmerge | 0.086 | 0.038 | 1.486 |
Rmeas | 0.089 | 0.040 | 1.541 |
Rpim | 0.023 | 0.011 | 0.404 |
Total number of observations | 2020815 | 13282 | 92162 |
Number of reflections | 133111 | 1070 | 6458 |
<I/σ(I)> | 15.4 | 43.3 | 1.5 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 15.2 | 12.4 | 14.3 |
CC(1/2) | 0.999 | 0.998 | 0.524 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | 2 M ammonium sulfate |