7LTB
Crystal Structure of Keratinicyclin B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.652523 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 24.316, 29.667, 32.209 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.820 - 0.950 |
R-factor | 0.1462 |
Rwork | 0.146 |
R-free | 0.15090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7lkc |
RMSD bond length | 0.013 |
RMSD bond angle | 2.478 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.17-3644) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.210 | 32.210 | 0.900 |
High resolution limit [Å] | 0.890 | 4.860 | 0.890 |
Rmerge | 0.073 | 0.039 | 1.482 |
Rmeas | 0.076 | 0.041 | 1.638 |
Rpim | 0.022 | 0.012 | 0.667 |
Total number of observations | 216032 | 1486 | 4279 |
Number of reflections | 18474 | 149 | 787 |
<I/σ(I)> | 12.1 | 41.5 | 0.8 |
Completeness [%] | 99.1 | 99.8 | 85.9 |
Redundancy | 11.7 | 10 | 5.4 |
CC(1/2) | 0.999 | 0.999 | 0.547 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 295 | Peptide was mixed in a 3:1 ratio with 0.1 M sodium acetate (pH 4.6) and 2 M sodium formate alone |