Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7LPG

APE1 product complex with abasic ribonucleotide DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-14
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.54
Spacegroup nameP 1
Unit cell lengths44.118, 61.077, 73.039
Unit cell angles83.68, 78.07, 87.49
Refinement procedure
Resolution23.690 - 2.080
R-factor0.2214
Rwork0.219
R-free0.26270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dff
RMSD bond length0.009
RMSD bond angle1.110
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX (1.17.1_3660)
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0002.140
High resolution limit [Å]2.0802.080
Rmeas0.119
Number of reflections752432151
<I/σ(I)>12.5
Completeness [%]99.597.9
Redundancy3.63.3
CC(1/2)0.680
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5291200 mM MgCl2, 100 mM Sodium Citrate (pH 5), 10-15% PEG 20,000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon