Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7LNU

Ternary complex of the Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus bound to isopentenyl monophosphate and ATP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2016-07-20
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.54178
Spacegroup nameP 21 21 21
Unit cell lengths40.892, 74.503, 171.691
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.390 - 2.500
R-factor0.2324
Rwork0.229
R-free0.28680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)cma apo model
RMSD bond length0.002
RMSD bond angle0.652
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.540
High resolution limit [Å]2.5002.500
Rmeas0.1000.681
Rpim0.0470.394
Number of reflections18714815
<I/σ(I)>11.91.93
Completeness [%]91.0
Redundancy4.2
CC(1/2)0.9910.650
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2750.1 M Bis-Tris, pH 5.5 28% PEG 3350 0.1 M Sodium Chloride

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon