7LKJ
Crystal structure of Helicobacter pylori aminofutalosine deaminase (AFLDA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-08-07 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.295, 73.295, 157.495 |
Unit cell angles | 90.00, 98.59, 90.00 |
Refinement procedure
Resolution | 155.727 - 2.790 |
R-factor | 0.2543 |
Rwork | 0.253 |
R-free | 0.28700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v7p |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 155.730 | 2.900 |
High resolution limit [Å] | 2.790 | 2.790 |
Rmerge | 0.200 | 1.100 |
Number of reflections | 39040 | 4432 |
<I/σ(I)> | 5 | 1.3 |
Completeness [%] | 94.2 | |
Redundancy | 3.6 | 3.3 |
CC(1/2) | 0.980 | 0.550 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 100 mM Sodium malonate pH 4.0 and 12% w/v polyethylene glycol 3,350 |