7LG3
Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-12-09 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9794 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.269, 78.281, 91.405 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.740 - 2.300 |
R-factor | 0.1919 |
Rwork | 0.190 |
R-free | 0.24760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h7b |
RMSD bond length | 0.008 |
RMSD bond angle | 1.495 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.670 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.196 | |
Rmeas | 0.218 | |
Rpim | 0.093 | |
Number of reflections | 20879 | 1005 |
<I/σ(I)> | 6.3 | 1.1 |
Completeness [%] | 99.3 | 98.2 |
Redundancy | 4.7 | 3.6 |
CC(1/2) | 0.982 | 0.370 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 290 | 20% PEG4000, 0.1 M sodium acetate, pH 5.6, 20% isopropanol |