7LG0
Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-12-09 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9794 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 71.723, 155.172, 88.165 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.950 - 2.300 |
R-factor | 0.2021 |
Rwork | 0.200 |
R-free | 0.26840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6at5 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.377 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.950 | 2.340 |
High resolution limit [Å] | 2.296 | 2.300 |
Rmerge | 0.100 | |
Number of reflections | 22281 | 1096 |
<I/σ(I)> | 8.9 | 2.2 |
Completeness [%] | 99.6 | 97.6 |
Redundancy | 6 | 5.7 |
CC(1/2) | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | 0.1 M HEPES-NaOH, pH 7.5, 2 M ammonium sulfate |