7LFA
Fab 3B6 bound to ApoL1 NTD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2016-11-30 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 |
Unit cell lengths | 52.753, 71.867, 123.436 |
Unit cell angles | 80.16, 85.05, 90.16 |
Refinement procedure
Resolution | 70.799 - 1.857 |
R-factor | 0.2065 |
Rwork | 0.205 |
R-free | 0.24160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vl5 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.310 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.990 | 2.044 |
High resolution limit [Å] | 1.857 | 1.858 |
Rmerge | 0.059 | 0.574 |
Rmeas | 0.701 | |
Rpim | 0.059 | 0.496 |
Number of reflections | 82724 | 4136 |
<I/σ(I)> | 3.6 | 1.6 |
Completeness [%] | 89.6 | 52.2 |
Redundancy | 3.2 | 3 |
CC(1/2) | 0.998 | 0.635 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 40% MPD, 5% PEG 8000, 0.1M Na Cacodylate pH 6.5 |