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7LEO

C1B domain of Protein kinase C in complex with diacylglycerol-lactone (AJH-836) and 1,2-diheptanoyl-sn-glycero-3-phosphocholine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]120
Detector technologyCCD
Collection date2020-11-21
DetectorADSC QUANTUM 315r
Wavelength(s)0.98
Spacegroup nameC 1 2 1
Unit cell lengths83.388, 50.888, 37.485
Unit cell angles90.00, 107.72, 90.00
Refinement procedure
Resolution29.960 - 1.650
R-factor0.2248
Rwork0.224
R-free0.24390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ptq
RMSD bond length0.006
RMSD bond angle1.100
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.680
High resolution limit [Å]1.6404.4801.650
Rmerge0.1040.0760.831
Rmeas0.1160.0850.964
Rpim0.0490.0370.479
Number of reflections17721920882
<I/σ(I)>7.4
Completeness [%]98.59898.1
Redundancy5.45.43.7
CC(1/2)0.9930.9920.568
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5277.15Screen condition: 0.2 M Ammonium acetate 0.1 M Sodium Phosphate 15% Isopropanol pH 6.8; Drop condition: Protein 2 mM in MES pH 6.5, 150 mM KCl; Phosphatidylcholine: 20 mM; AJH-836: 2.2 mM

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PDB entries from 2024-05-15

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