7LD8
Crystal Structure of Putative non-heme bromoperoxidase BpoC from Mycobacterium tuberculosis H37Rv
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-12-10 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 48.550, 113.500, 43.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.370 - 1.500 |
R-factor | 0.1362 |
Rwork | 0.134 |
R-free | 0.17780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hss |
RMSD bond length | 0.005 |
RMSD bond angle | 0.759 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | PHENIX (1.19rc4-4035) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.540 |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.039 | 0.024 | 0.323 |
Rmeas | 0.042 | 0.026 | 0.352 |
Number of reflections | 38202 | 511 | 2516 |
<I/σ(I)> | 28.16 | 56.25 | 5.37 |
Completeness [%] | 97.3 | 97.5 | 88 |
Redundancy | 7.164 | 6.002 | 6.179 |
CC(1/2) | 1.000 | 0.999 | 0.947 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 287 | MytuD.00095.b.B1.PW38899[Barcode: 318836d7, PuckID: neu1-3, Cryo: 20% EG, Concentration: 18 mg/mL] 100 mM Sodium Citrate/Citric Acid pH 5.5, 20% (w/v) PEG 3000 |