7LC7
Crystal structure of epoxyqueuosine reductase QueH in complex with GMP from Thermotoga maritima
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.033 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 53.335, 104.783, 73.741 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.530 - 1.580 |
R-factor | 0.2021 |
Rwork | 0.200 |
R-free | 0.24290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7lc5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.902 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.530 | 1.633 |
High resolution limit [Å] | 1.576 | 1.576 |
Rmerge | 0.079 | 0.675 |
Rmeas | 0.086 | 0.735 |
Rpim | 0.033 | 0.287 |
Number of reflections | 27990 | 2694 |
<I/σ(I)> | 13.25 | 2.09 |
Completeness [%] | 96.8 | 94.29 |
Redundancy | 6.7 | 6.4 |
CC(1/2) | 0.997 | 0.834 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 100 mM Bis-Tris, pH 5.5, 200 mM lithium sulfate monohydrate, 25% PEG3350 |