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7L5T

Crystal Structure of the Oxacillin-hydrolyzing Class D Extended-spectrum Beta-lactamase OXA-14 from Pseudomonas aeruginosa in Complex with Covalently Bound Clavulanic Acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2020-05-13
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths48.940, 95.451, 125.974
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.910 - 1.880
R-factor0.1687
Rwork0.167
R-free0.19600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1e3u
RMSD bond length0.006
RMSD bond angle1.321
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.910
High resolution limit [Å]1.8801.880
Rmerge0.0710.841
Rmeas0.0770.916
Rpim0.0310.360
Number of reflections487532374
<I/σ(I)>25.32.8
Completeness [%]100.0100
Redundancy6.26.3
CC(1/2)0.9980.848
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP292Protein: 8.0 mg/ml, 0.01M Tris pH 8.3; Screen - AmSO4 (F6): 0.1M Bicine pH 9.0, 2.4M Ammonium sulfate; Soak & Cryo: 50mM Clavulanic acid, 2M Lithium sulfate, 10 min

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PDB entries from 2024-05-15

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