7L59
Crystal structure of the dark-adapted full-length bacteriophytochrome XccBphP-G454E variant from Xanthomonas campestris in the Pfr state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9801 |
Spacegroup name | I 41 |
Unit cell lengths | 182.035, 182.035, 40.059 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.510 - 2.680 |
R-factor | 0.198 |
Rwork | 0.196 |
R-free | 0.23600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5akp |
RMSD bond length | 0.010 |
RMSD bond angle | 1.190 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.510 | 2.810 |
High resolution limit [Å] | 2.680 | 2.680 |
Rmerge | 0.096 | 1.431 |
Rmeas | 0.100 | 1.479 |
Rpim | 0.025 | 0.374 |
Number of reflections | 18944 | 2464 |
<I/σ(I)> | 15.9 | 1.9 |
Completeness [%] | 100.0 | 100 |
Redundancy | 15.3 | 15.5 |
CC(1/2) | 0.999 | 0.771 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 | 294 | 30% (w/v) pentaerythritol propoxylate (5/4 PO/OH), 0.1 M MES |