7L3U
Crystal structure of I107E F33Y CuB myoglobin (I107E F33Y L29H F43H sperm whale myoglobin)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2013-06-04 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9786 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.670, 47.873, 77.876 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.490 - 1.470 |
R-factor | 0.2026 |
Rwork | 0.201 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fwx |
RMSD bond length | 0.015 |
RMSD bond angle | 1.921 |
Data reduction software | HKL-2000 (2.3.1) |
Data scaling software | HKL-2000 (2.3.1) |
Phasing software | PHENIX (1.8.2_1309) |
Refinement software | PHENIX (1.19rc7_4070) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.510 |
High resolution limit [Å] | 1.470 | 4.020 | 1.470 |
Rmerge | 0.047 | 0.033 | 0.534 |
Number of reflections | 25784 | 1394 | 1268 |
<I/σ(I)> | 12 | ||
Completeness [%] | 99.8 | 97.5 | 99.9 |
Redundancy | 3.8 | 3.4 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.6 | 277 | 1.5-2.0 mM protein in 20 mM tris sulfate pH 8.0 buffer, mixed 1:1 with crystallization solution composed of 100 mM tris sulfate pH 8.6, 200 mM sodium acetate, and 30% w/v PEG 10000, to yield a final volume of 150-200uL; this was equilibrated against 30mL of same crystalization solution. |